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t

com.jnpersson.kmers

SplitterFormat

trait SplitterFormat[P <: MinimizerPriorities] extends AnyRef

Logic for persisting minimizer formats (ordering and parameters) to files.

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AnyRef, Any
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RandomXORFormat, StandardFormat, ExtendedFormat
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Abstract Value Members

  1. abstract def id: String
  2. abstract def read(location: String, props: Properties)(implicit spark: SparkSession): P
  3. abstract def write(priorities: P, props: Properties, location: String)(implicit spark: SparkSession): Unit

    Write minimizer priorities (i.e.

    Write minimizer priorities (i.e. minimizer ordering) to a file

    priorities

    The ordering to write

    props

    Properties that can optionally be written to

    location

    Prefix of the location to write to. A suffix will be appended to this name.

Concrete Value Members

  1. final def !=(arg0: Any): Boolean
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  2. final def ##(): Int
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  3. final def ==(arg0: Any): Boolean
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    protected[lang]
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    @throws( ... ) @native() @IntrinsicCandidate()
  6. def decorate(priorities: P, props: Properties): MinimizerPriorities
  7. final def eq(arg0: AnyRef): Boolean
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  8. def equals(arg0: Any): Boolean
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  9. final def getClass(): Class[_]
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  10. def hashCode(): Int
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  11. final def isInstanceOf[T0]: Boolean
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  12. final def ne(arg0: AnyRef): Boolean
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  13. final def notify(): Unit
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    @native() @IntrinsicCandidate()
  14. final def notifyAll(): Unit
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    @native() @IntrinsicCandidate()
  15. def readAndDecorate(location: String, props: Properties)(implicit spark: SparkSession): MinimizerPriorities
  16. def readSplitter(location: String, props: Properties)(implicit spark: SparkSession): AnyMinSplitter
  17. final def synchronized[T0](arg0: ⇒ T0): T0
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  18. def toString(): String
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  19. final def wait(arg0: Long, arg1: Int): Unit
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  20. final def wait(arg0: Long): Unit
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  21. final def wait(): Unit
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Deprecated Value Members

  1. def finalize(): Unit
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    @throws( classOf[java.lang.Throwable] ) @Deprecated
    Deprecated

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