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object Output

Output format helper methods

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  19. def writeFasta(allKmers: Dataset[(NTSeq, String)], writeLocation: String)(implicit spark: SparkSession): Unit

    Write sequences as a FASTA file.

    Write sequences as a FASTA file.

    allKmers

    data to write (pairs of (sequence, header)

    writeLocation

    location to write (prefix name, a suffix will be appended)

  20. def writeTSV[A](data: Dataset[A], writeLocation: String): Unit

    Write a data table as TSV to the filesystem.

    Write a data table as TSV to the filesystem.

    data

    data to write

    writeLocation

    location to write (prefix name, a suffix will be appended)

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