Packages

t

com.jnpersson.kmers

MinimizerFormats

trait MinimizerFormats[C <: MinimizerCLIConf] extends AnyRef

Management of the set of minimizer formats supported by an application. Allows for constructing a MinSplitter from a configuration, and for looking up SplitterFormat by id (string) or by class.

C

Supported configuration type

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AnyRef, Any
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AllMinimizerFormats
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Abstract Value Members

  1. abstract def formatsByCls: Map[Class[_], SplitterFormat[_]]
    Attributes
    protected
  2. abstract def formatsById: Map[String, SplitterFormat[_]]
    Attributes
    protected
  3. abstract def makeSplitter(config: C): MinSplitter[_]

    Make a MinSplitter from a configuration.

Concrete Value Members

  1. final def !=(arg0: Any): Boolean
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  2. final def ##(): Int
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  3. final def ==(arg0: Any): Boolean
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  6. final def eq(arg0: AnyRef): Boolean
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  7. def equals(arg0: Any): Boolean
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  8. final def getClass(): Class[_]
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    @native() @IntrinsicCandidate()
  9. def getFormat[P <: MinimizerPriorities](p: P): SplitterFormat[P]
  10. def getFormat[P <: MinimizerPriorities](cls: Class[_ <: P]): SplitterFormat[P]

    Obtain a previously registered SplitterFormat by class

  11. def getFormat(id: String): SplitterFormat[_]

    Obtain a previously registered SplitterFormat by id

  12. def hashCode(): Int
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    @native() @IntrinsicCandidate()
  13. final def isInstanceOf[T0]: Boolean
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  14. final def ne(arg0: AnyRef): Boolean
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  15. final def notify(): Unit
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  16. final def notifyAll(): Unit
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  17. final def synchronized[T0](arg0: ⇒ T0): T0
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  18. def toString(): String
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  19. final def wait(arg0: Long, arg1: Int): Unit
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  20. final def wait(arg0: Long): Unit
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  21. final def wait(): Unit
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Deprecated Value Members

  1. def finalize(): Unit
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    @throws( classOf[java.lang.Throwable] ) @Deprecated
    Deprecated

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