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object Reducer

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  1. final def !=(arg0: Any): Boolean
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  2. final def ##(): Int
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  3. final def ==(arg0: Any): Boolean
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  4. final def asInstanceOf[T0]: T0
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  5. def cappedLongToInt(x: Long): Int

    Convert a Long to Int without overflowing Int.MaxValue

  6. def clone(): AnyRef
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    @throws( ... ) @native()
  7. def configure(k: Int, forwardOnly: Boolean, intersect: Boolean, reduction: Rule): Reducer

    Configure a Reducer.

    Configure a Reducer.

    k

    The length of k-mers

    forwardOnly

    Whether only forward k-mers should be kept

    intersect

    Whether the reduction is an intersection type (if not, it's a union)

    reduction

    The reduction rule

  8. final def eq(arg0: AnyRef): Boolean
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  9. def equals(arg0: Any): Boolean
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  10. def finalize(): Unit
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    @throws( classOf[java.lang.Throwable] )
  11. final def getClass(): Class[_]
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  12. def hashCode(): Int
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  13. final def isInstanceOf[T0]: Boolean
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  14. final def ne(arg0: AnyRef): Boolean
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  15. final def notify(): Unit
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  16. final def notifyAll(): Unit
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  17. def parseRule(rule: String): Rule
  18. final def synchronized[T0](arg0: ⇒ T0): T0
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  19. def toString(): String
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  20. def union(k: Int, forwardOnly: Boolean, reduction: Rule = Sum): Reducer

    Configure a union Reducer.

    Configure a union Reducer.

    k

    The length of k-mers

    forwardOnly

    Whether only forward k-mers should be kept

    reduction

    The reduction rule

  21. final def wait(): Unit
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  22. final def wait(arg0: Long, arg1: Int): Unit
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  23. final def wait(arg0: Long): Unit
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