class LongReadsRecordReader extends RecordReader[Text, PartialSequence]
This class reads <key, value>
pairs from an InputSplit
.
The input file is in FASTA format and contains a single long sequence.
A FASTA record has a header line that is the key, and data lines
that are the value.
>header...
data
...
Example:
>Seq1
TAATCCCAAATGATTATATCCTTCTCCGATCGCTAGCTATACCTTCCAGGCGATGAACTTAGACGGAATCCACTTTGCTA
CAACGCGATGACTCAACCGCCATGGTGGTACTAGTCGCGGAAAAGAAAGAGTAAACGCCAACGGGCTAGACACACTAATC
CTCCGTCCCCAACAGGTATGATACCGTTGGCTTCACTTCTACTACATTCGTAATCTCTTTGTCAGTCCTCCCGTACGTTG
GCAAAGGTTCACTGGAAAAATTGCCGACGCACAGGTGCCGGGCCGTGAATAGGGCCAGATGAACAAGGAAATAATCACCA
CCGAGGTGTGACATGCCCTCTCGGGCAACCACTCTTCCTCATACCCCCTCTGGGCTAACTCGGAGCAAAGAACTTGGTAA
...
- Version
1.0
- See also
InputSplit
Linear Supertypes
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getCurrentKey(): Text
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