class FASTAshortInputFileFormat extends FileInputFormat[Text, Record]
A FileInputFormat for reading FASTA files containing
short sequences.
- Version
1.0
- See also
FileInputFormat
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- FASTAshortInputFileFormat
- FileInputFormat
- InputFormat
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Instance Constructors
- new FASTAshortInputFileFormat()
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final
def
!=(arg0: Any): Boolean
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final
def
##(): Int
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final
def
==(arg0: Any): Boolean
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def
addInputPathRecursively(arg0: List[FileStatus], arg1: FileSystem, arg2: Path, arg3: PathFilter): Unit
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
- Annotations
- @throws( classOf[java.io.IOException] )
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final
def
asInstanceOf[T0]: T0
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def
clone(): AnyRef
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def
computeSplitSize(arg0: Long, arg1: Long, arg2: Long): Long
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
createRecordReader(split: InputSplit, context: TaskAttemptContext): RecordReader[Text, Record]
- Definition Classes
- FASTAshortInputFileFormat → InputFormat
- Annotations
- @Override()
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final
def
eq(arg0: AnyRef): Boolean
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def
equals(arg0: Any): Boolean
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def
finalize(): Unit
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def
getBlockIndex(arg0: Array[BlockLocation], arg1: Long): Int
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- protected[input]
- Definition Classes
- FileInputFormat
-
final
def
getClass(): Class[_]
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- @native()
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def
getFormatMinSplitSize(): Long
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
getSplits(arg0: JobContext): List[InputSplit]
- Definition Classes
- FileInputFormat → InputFormat
- Annotations
- @throws( classOf[java.io.IOException] )
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def
hashCode(): Int
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final
def
isInstanceOf[T0]: Boolean
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def
isSplitable(arg0: JobContext, arg1: Path): Boolean
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
listStatus(arg0: JobContext): List[FileStatus]
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
- Annotations
- @throws( classOf[java.io.IOException] )
-
def
makeSplit(arg0: Path, arg1: Long, arg2: Long, arg3: Array[String], arg4: Array[String]): FileSplit
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
makeSplit(arg0: Path, arg1: Long, arg2: Long, arg3: Array[String]): FileSplit
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
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final
def
ne(arg0: AnyRef): Boolean
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final
def
notify(): Unit
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final
def
notifyAll(): Unit
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final
def
synchronized[T0](arg0: ⇒ T0): T0
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def
toString(): String
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final
def
wait(): Unit
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final
def
wait(arg0: Long, arg1: Int): Unit
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final
def
wait(arg0: Long): Unit
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Inherited from FileInputFormat[Text, Record]
Value Members
-
def
addInputPathRecursively(arg0: List[FileStatus], arg1: FileSystem, arg2: Path, arg3: PathFilter): Unit
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
- Annotations
- @throws( classOf[java.io.IOException] )
-
def
computeSplitSize(arg0: Long, arg1: Long, arg2: Long): Long
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
getBlockIndex(arg0: Array[BlockLocation], arg1: Long): Int
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
getFormatMinSplitSize(): Long
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
getSplits(arg0: JobContext): List[InputSplit]
- Definition Classes
- FileInputFormat → InputFormat
- Annotations
- @throws( classOf[java.io.IOException] )
-
def
isSplitable(arg0: JobContext, arg1: Path): Boolean
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
listStatus(arg0: JobContext): List[FileStatus]
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
- Annotations
- @throws( classOf[java.io.IOException] )
-
def
makeSplit(arg0: Path, arg1: Long, arg2: Long, arg3: Array[String], arg4: Array[String]): FileSplit
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
makeSplit(arg0: Path, arg1: Long, arg2: Long, arg3: Array[String]): FileSplit
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
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final
def
!=(arg0: Any): Boolean
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final
def
##(): Int
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final
def
==(arg0: Any): Boolean
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def
clone(): AnyRef
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final
def
eq(arg0: AnyRef): Boolean
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def
equals(arg0: Any): Boolean
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def
finalize(): Unit
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final
def
getClass(): Class[_]
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def
hashCode(): Int
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final
def
ne(arg0: AnyRef): Boolean
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final
def
notify(): Unit
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- Annotations
- @native()
-
final
def
notifyAll(): Unit
- Definition Classes
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- Annotations
- @native()
-
final
def
synchronized[T0](arg0: ⇒ T0): T0
- Definition Classes
- AnyRef
-
def
toString(): String
- Definition Classes
- AnyRef → Any
-
final
def
wait(): Unit
- Definition Classes
- AnyRef
- Annotations
- @throws( ... )
-
final
def
wait(arg0: Long, arg1: Int): Unit
- Definition Classes
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final
def
wait(arg0: Long): Unit
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final
def
!=(arg0: Any): Boolean
- Definition Classes
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-
final
def
##(): Int
- Definition Classes
- AnyRef → Any
-
final
def
==(arg0: Any): Boolean
- Definition Classes
- AnyRef → Any
-
def
addInputPathRecursively(arg0: List[FileStatus], arg1: FileSystem, arg2: Path, arg3: PathFilter): Unit
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
- Annotations
- @throws( classOf[java.io.IOException] )
-
final
def
asInstanceOf[T0]: T0
- Definition Classes
- Any
-
def
clone(): AnyRef
- Attributes
- protected[lang]
- Definition Classes
- AnyRef
- Annotations
- @throws( ... ) @native()
-
def
computeSplitSize(arg0: Long, arg1: Long, arg2: Long): Long
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
createRecordReader(split: InputSplit, context: TaskAttemptContext): RecordReader[Text, Record]
- Definition Classes
- FASTAshortInputFileFormat → InputFormat
- Annotations
- @Override()
-
final
def
eq(arg0: AnyRef): Boolean
- Definition Classes
- AnyRef
-
def
equals(arg0: Any): Boolean
- Definition Classes
- AnyRef → Any
-
def
finalize(): Unit
- Attributes
- protected[lang]
- Definition Classes
- AnyRef
- Annotations
- @throws( classOf[java.lang.Throwable] )
-
def
getBlockIndex(arg0: Array[BlockLocation], arg1: Long): Int
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
final
def
getClass(): Class[_]
- Definition Classes
- AnyRef → Any
- Annotations
- @native()
-
def
getFormatMinSplitSize(): Long
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
getSplits(arg0: JobContext): List[InputSplit]
- Definition Classes
- FileInputFormat → InputFormat
- Annotations
- @throws( classOf[java.io.IOException] )
-
def
hashCode(): Int
- Definition Classes
- AnyRef → Any
- Annotations
- @native()
-
final
def
isInstanceOf[T0]: Boolean
- Definition Classes
- Any
-
def
isSplitable(arg0: JobContext, arg1: Path): Boolean
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
listStatus(arg0: JobContext): List[FileStatus]
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
- Annotations
- @throws( classOf[java.io.IOException] )
-
def
makeSplit(arg0: Path, arg1: Long, arg2: Long, arg3: Array[String], arg4: Array[String]): FileSplit
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
def
makeSplit(arg0: Path, arg1: Long, arg2: Long, arg3: Array[String]): FileSplit
- Attributes
- protected[input]
- Definition Classes
- FileInputFormat
-
final
def
ne(arg0: AnyRef): Boolean
- Definition Classes
- AnyRef
-
final
def
notify(): Unit
- Definition Classes
- AnyRef
- Annotations
- @native()
-
final
def
notifyAll(): Unit
- Definition Classes
- AnyRef
- Annotations
- @native()
-
final
def
synchronized[T0](arg0: ⇒ T0): T0
- Definition Classes
- AnyRef
-
def
toString(): String
- Definition Classes
- AnyRef → Any
-
final
def
wait(): Unit
- Definition Classes
- AnyRef
- Annotations
- @throws( ... )
-
final
def
wait(arg0: Long, arg1: Int): Unit
- Definition Classes
- AnyRef
- Annotations
- @throws( ... )
-
final
def
wait(arg0: Long): Unit
- Definition Classes
- AnyRef
- Annotations
- @throws( ... ) @native()